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Table of Contents

Last Updated March, 2002

Foreword by Sir James Black
Preface
Contributors

1 Receptor Binding
2 Signal Transduction
3 Enzyme Assays
4 Isolated Tissues
5 Animal Models of Disease
6 Molecular Biology
7 Pharmacokinetics
8 Receptor/Enzyme Localization
9 Drug Discovery Technologies
10 Safety Pharmacology/Toxicology
11 Electrophysiological Techniques
12 In Vitro Cellular Assays
Appendices
Index

 


1 Receptor Binding

1.1 Receptors as Drug Targets
1.2 Receptor Theory
1.3 Practical Aspects of Radioligand Binding
1.4 Characterization of Opioid Receptors
1.5 Characterization of Adrenoceptors
1.6 Characterization of Dopamine Receptors
1.7 Characterization of GABA Receptors
1.8 Characterization of Neuronal Nicotinic Acetylcholine Receptors
1.9 Characterization of P1 (Adenosine) Purinoceptors
1.10 Characterization of Angiotensin II Receptors
1.11 Characterization of Neuropeptide Y Receptors
1.12 Characterization of Cholecystokinin Recptors
1.13 Characterization of CRF Receptors
1.14 Characterization of Wild-Type Excitatory Amino Acid Ion Channels Receptors
1.15 Characterization of Tachykinin Receptors
1.16 Characterization of Benzodiazepine Binding to GABAA Receptors
1.17 Characterization of Potassium Channel Binding
1.18 Characterization of the Picrotoxin Site of GABAA Receptors
1.19 Characterization of Histaminergic Receptors
1.20 Radioligand Assay of Drug Activity at the Glycine Site of the NMDA Receptor
1.21 Overview of Receptor Allosterism
1.22 Quantification of Allosteric Interactions at G Protein Coupled Receptors Using Radioligand Binding Assays
1.23 Characterization of 5-HT1A,B and 5-HT2A,C Serotonin Receptor Binding
1.24 Characterization of Chemokine Receptors
1.25 Characterization of Calcium Channel Binding 
1.26 Characterization of Cannabinoid Receptors (New, March 2002)
 

2 Signal Transduction

2.1 Overview of Signal Transduction
2.2 Adenylate and Guanylate Cyclase Assays
2.3 Overview of Phosphoinositide Hydrolysis
2.4 Nitric Oxide Synthase Assays
2.5 Analysis of Early Gene Responses
2.6 Agonist-Stimulated [35S]GTPgS Binding
2.7 Assay of Receptor-Stimulated Phosphoinositide Turnover

3 Enzyme Assays

3.1 Cyclooxygenase Assays
3.2 HIV Protease Assays
3.3 Topoisomerase Assays
3.4 Protein Farnesyltransferase Assays
3.5 Protein Tyrosine Kinase Activity Assays
3.6 Monoamine Oxidase Assays
3.7 Characterization of Matrix Metalloproteinase Inhibitors: Enzymatic Assays 
3.8 In Vitro Enzymatic Assays of Protein Tyrosine Phosphatase 1B
3.9 Cytochrome P450 Assays (New, December 2001)
3.10 Measurement of Glutamate Carboxypeptidase II (NAALADase) Enzyme Activity by the Hydrolysis of [3H]-N Acetylaspartylglutamate (NAAG) (New, December 2001)

4 Isolated Tissues

4.1 Overview of Receptor Interactions of Agonists and Antagonists
4.2 Overview of Length-Tension Relationships in Isolated Tissues
4.3 Isolated Cardiac Muscle Assays
4.4 Isolated Blood Vessel Assays
4.5 a- Adrenoceptor Assays
4.6 b- Adrenoceptor Assays
4.7 P1 (Adenosine) Purinoceptor Assays
4.8 Opioid Receptor Assays
4.9 Angiotensin II Receptor Assays
4.10 Tachykinin Receptor Assays
4.11 Neuropeptide Y (NPY) Receptor Assays
4.12 Nicotinic Acetylcholine Receptor Assays
4.13 Cholecystokinin (CKK) Assays
4.14 Dopamine 2 (DA-2) Receptor Assays Using Sympathetic Nerve Terminals
4.15 Muscarinic Receptor Assays
4.16 Cysteinyl Leukotriene Receptor Assays
4.17 Histamine Receptor Assays 
4.18 Prostanoid Receptor Assays
 

5 Animal Models of Disease

5.1 Models of Cardiovascular Disease: Measurement of Arrhythmogenic/Antiarrhythmic Activity in the Guinea Pig and Antihypertensive Activity in the Conscious Rat
5.2 Models of Pulmonary Disease: Acute and Chronic Allergic Asthma in the Monkey and Acute and Chronic Viral Pulmonitis in the Mouse
5.3 Gastrointestinal Models: Intestinal Transit and Ulcerogenic Activity in the Rat
5.4 Models of Inflammation: Carrageenan-Induced Paw Edema in the Rat
5.5 Models of Inflammation: Adjuvant-Induced Arthritis in the Rat
5.6 Models of Inflammation: Carrageenan Air Pouch in the Rat
5.7 Models of Pain: Hot-Plate and Formalin Tests in Rodents
5.8 Models of Affective Illness: Forced Swimming and Tail Suspension Tests in Rodents
5.9 Affective Illness: Chronic Mild Stress
5.10 Urogenital Dysfunction: Benign Prostatic Hyperplasia
5.11 Models of Urogenital Dysfunction: Urinary Urge Incontinence (UUI)
5.12 Models of Urogenital Dysfunction: Volume-Evoked Micturition Reflex (VEMR) in the Conscious Rat
5.13 Models of Dimentia: Delayed Alternation in Aged Rats
5.14 Spatial Discrimination Water Maze Test in Septal-Lesioned Rats
5.15 Models of Schizophrenia: PPI of Startle in Rats
5.16 Models of Anxiety: Stress-Induced Hyperthermia in Group-Housed Mice
5.17 Models for Assessing Antipsychotics: Amphetamine-Induced Hyperactivity and Stereotypies in Mice
5.18 Models of Anxiety: Ultrasonic Vocalizations of Isolated Rat Pups
5.19 Models for Environmentally Induced Eating Disorders: Dietary Hyperphagia and Anorexia Nervosa
5.20 Overview of the Use of Transgenic Animals in CNS Drug Discovery
5.21 Models of Renal Insufficiency: The Anti-Thy-1.1 Model of Acute Proliferative Glomerulonephritis
5.22 Models of Epilepsy: Electroshock and Chemical Induced Convulsions in the Mouse
5.23 Characterization of Matrix Metalloproteinase Inhibitors: Angiogenesis and Tumor Models 
5.24 Classic In Vivo Cancer Models: Three Examples of Mouse Models Used in Experimental Therapeutics (New, December 2001)
5.25 Overview of Animal Models of Asthma (New, March 2002)
5.26 Guinea Pig Models of Asthma (New, March 2002)
5.27 Models of Cardiac Ischemia-Reperfusion Injury in Dogs and Rats (New, March 2002)

6 Molecular Biology

6.1 Overview of Receptor Cloning
6.2 Receptor Reporter Systems
6.3 Expression of Cloned Receptors in Mammalian Cell Lines
6.4 Isotopic Assays for Reporter Gene Activity
6.5 Nonisotopic Assays for Reporter Gene Activity
6.6 Use of the A. Victoria Green Fluorescent Protein to Study Protein Dynamics In Vivo
6.7 Enzymatic Amplification of DNA by PCR: Standard Procedures and Optimization
6.8 Mobility Shift DNA-Binding Assay Using Gel Electrophoresis 

7 Pharmacokinetics

7.1 Overview of Pharmacokinetics
7.2 Estimating Intestinal Mucosal Permeation of Compounds Using Caco-2 Cell Monolayers
7.3 Overview of Drug Product Development (New, December 2001)

8 Receptor/Enzyme Localization

8.1 In Vitro Autoradiography
8.2 Autoradiographic Localization of Growth Factor Receptors in Neuronal Tissues

9 Drug Discovery Technologies

9.1 Overview of Chemical Diversity
9.2 Cell-Based Assays Using the Fluorometric Imaging Plate Reader (FLIPR)
9.3 Overview of Combinatorial Chemistry
9.4 Overview of High-Throughput Screening
9.5 Screening in Constitutively Active Receptor  Systems
 

10 Safety Pharmacology/Toxicology

10.1 Overview of Safety Pharmacology
10.2 Models of Inflammation: Gastrointestinal Ulceration in the Rat
10.3 Toxicology in Drug Discovery and Development
10.4 Place Preference Test in Rats
10.5 Substance Abuse: Self-Administration in Monkeys
10.6 Vigilance-Controlled Quantified EEG in Safety Pharmacology
10.7 An Overview of QT Interval Assessment in Safety  Pharmacology

11 Electrophysiological Techniques

11.1 Overview of Electrophysiology
11.2 Electrophysiological Analysis of G Protein-Coupled Receptors in Mammalian Neurons
11.3 The Action Potential of the Purkinje Fiber: An In Vitro Model for Evaluation of the Proarrhythmic Potential of Cardiac and Noncardiac Drugs (New, December 2001)

12 In Vitro Cellular Assays

12.1 Overview of Cell and Tissue Culture Techniques
12.2 Chondrocyte Culture and Assay
12.3 Preparation of Nuclear and Cytoplasmic Extracts from Mammalian Cell
12.4 Cellular Assays of Chemokine Receptor Activation 
 

Appendices

A.1 NOMENCLATURE AND USEFUL DATA
A. Enzyme Nomenclature
B. Receptor Nomenclature Guidelines
 

A.2 STOCK SOLUTIONS, EQUIPMENT, AND LABORATORY GUIDELINES
A. Common Stock Solutions, Buffers, and Media
B. Standard Laboratory Equipment and Supplies
 

A.3 STANDARD TECHNIQUES
A. Assays for Total Protein
B. Protein Analysis by SDS-PAGE and Detection by Coomassie Blue or Silver Staining
C. Purification and Concentration of DNA from Aqueous Solutions
D. Fixation, Embedding, and Sectioning of Tissues, Embryos, and Single Cells
E. Cryosectioning
F. In Situ Hybridization to Cellular RNA

Index

 
 

 

 

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