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This Featured Protocol presents the full text of a cutting-edge Unit from Current Protocols in Pharmacology, including expert commentary sections with critical information designed to ensure the success of your experiments.
Copyright; 1998 John Wiley & Sons, Inc. All rights reserved.
This unit presents two convenient radioligand binding assay methods for opioid receptors. These are applicable to all three of the opioid receptors that have been cloned to date (the µ, k, and d receptors; see Table 1.4.1), and can be used with numerous commercially available radiolabeled ligands. Moreover, they can serve as reasonable starting points in the development of new assays. The two protocols detail a method for determining the binding of radioligand to cloned opioid receptors expressed on the surface of cultured cells (see Basic Protocol 1) and a similar method to study radioligand binding to receptors from tissue homogenates (see Alternate Protocol). Also included is a procedure for titrating inhibitors of opioid receptor-ligand binding (see Basic Protocol 2), along with guidelines for analysis of the resulting data (see Support Protocol).
NOTE: All protocols using live animals must first be reviewed and approved by an Institutional Animal Care and Use Committee (IACUC) or must conform to governmental regulations regarding the care and use of laboratory animals.
Quantities can be scaled up or down if desired. One person can generally
harvest about 60 500-cm2 plates in a day,
which yield 1 g of protein. 100 µg protein is required per assay
.
Homogenization time may be optimized by examining cells microscopically,
but ~30 sec at the lowest setting (1.0) should be sufficient.
The resuspension volume will be learned by experience. However, the
amount of protein can initially be estimated to be ~10% of the wet weight
of the pellets.
Prolonged incubation can affect the integrity/stability of the receptors.
The final protein concentration must be determined experimentally for each preparation of cells, because even stably expressed receptors may be totally or partially lost. The final protein concentration should be selected such that specific receptor binding increases linearly with increasing protein concentration, total radioactivity bound is < 10% of added radioactivity, and the ratio of specific to nonspecific binding is optimized.
Naloxone (10 µM final concentration) is used to define nonspecific binding.
It is generally not practical to use an assay volume < 500 µl with tritiated opioid ligands. At smaller volumes, the concentration of radioligand needed may be higher than the Kd of the ligand and the applicable equations may be invalid. The minimum volume of addition is 50 µl, especially in the case of radioligand, because pipetting errors are unacceptably large when smaller volumes are added to plastic wells, which are hydrophobic.
Although the order of addition is not important in an equilibrium assay, adding membranes last in a volume at least half of the final total volume provides good mixing of the reagents. This is necessary because it is not practical to mix assay solutions in 1-ml-capacity wells in microtiter plates. Nonspecific binding may be determined with any opioid ligand at 100 times its Kd value for that receptor to ensure saturation of the sites. Naloxone is generally used because it is inexpensive, and it inhibits only opioid receptor binding.
For many opioid ligands, 1 hr at room temperature is sufficient to achieve equilibrium. However, this must be determined experimentally by measuring the binding at various times and choosing a time after which no further increase in binding occurs. Binding assays may also be carried out in an ice-water bath. This may be useful for less stable ligands (e.g., peptides) or to slow dissociation rates for rapidly equilibrating systems in which specific binding may be lost during the filter rinse (step 15).
The rinse conditions must be established experimentally. The goal is to remove excess radioligand trapped in or loosely bound to the membranes or filters without rinsing away specifically bound radioligand. This can be done by testing the number and volume of rinses to determine a point at which nonspecific binding is minimized and specific binding is unchanged.
Steps 5 and 6 are important in order to denature and remove endogenous opioid peptides from the membrane preparation.
U-50,488H (10 µM) can be used to determine nonspecific binding.
For many ligands, 1 hr at room temperature is sufficient to achieve equilibrium. However, this must be determined experimentally by measuring the binding at various times and choosing a time after which no further increase in binding occurs. Binding assays may also be carried out in an ice-water bath. This may be useful for less stable ligands (e.g., peptides) to slow dissociation rates for rapidly equilibrating systems, in which specific binding may be lost during the filter rinse (step 15).
Polyethylenimine soaking is not required in this assay.
Since computer programs perform nonlinear regression analysis using every point in a titration curve simultaneously, there is greater confidence when measuring a large number of concentrations of inhibitor than when measuring binding at a few concentrations of inhibitor with replicate measurements. In addition, determinations of total and residual binding must be very accurate for nonlinear curve-fitting routines. It is not strictly correct to refer to radioligand binding that remains at high concentrations of an inhibitor as nonspecific binding, since it may be bound to a site not inhibited by the test compound.
One explanation for such behavior may be that the inhibitor acts by allosterically modifying the receptor without necessarily binding to the same site as the radioligand. Nonlinear regression programs make no assumptions about how much binding may exist in the absence of test compound or whether the inhibition of binding by a test compound represents 100% inhibition of specific receptor binding. The best way to obtain accurate determinations of the binding in the absence of inhibitor and in the presence of large excess of inhibitor is by including several concentrations of test compound that do not inhibit binding at all and several that inhibit binding fully. These data points are very important to determine the goodness of fit of the data by nonlinear regression. A standard procedure is to test twelve concentrations of competitor at half-log intervals in the twelve wells of a single row in a 96-well microtiter plate (see Table 1.4.2).
Most compounds are soluble in dimethyl sulfoxide which, at final
concentrations up to 1%, has no effect on either total or nonspecific binding
of opioid ligands. It is prudent to have previously determined the effects
of common solvents on the binding of the particular ligand and receptor
being tested or concomitantly run controls for the solvent.
This results in a concentration range of nearly 6 orders of magnitude (see Table 1.4.2).
Use 50 µl in Alternate Protocol step 11.
Analysis of these data using Prism yields the following data in the format shown in Table 1.4.3, where BOTTOM is the theoretical binding in the presence of an infinite dose of inhibitor, TOP is the binding in the absence of inhibitor, and the EC50 value is the concentration of inhibitor resulting in an extent of binding halfway between BOTTOM and TOP and therefore is a measure of the relative affinity of the inhibitor as illustrated in Figure 1.4.1.
The buffer can be stored overnight at room temperature.
Scatchard analysis and kinetic measurements are reviewed in UNITS 1.2 & 1.3. Prior to conducting routine experiments with a new assay, saturation curves, association rates, and dissociation rates should be determined experimentally. The reader is referred to the work of Gillan and Kosterlitz (1982), Lahti et al. (1985), Mansour et al. (1995b), and Xue et al. (1994) as a starting point for comparison of literature values to experimental data.
Castanas, E., Bourhim, N., Giraud, P., Boudouresque, F., Cantau, P., and Oliver, C. 1985b. Interaction of opiates with opioid binding sites in the bovine adrenal medulla: II. Interaction with k sites. J. Neurochem. 45:688-699.
Clark, M.J., Carter, B.D., and Medzihradsky, F. 1988. Selectivity of ligand binding to opioid receptors in brain membranes from the rat, monkey and guinea pig. Eur. J. Pharmacol. 148:343-351.
DeLean, A., Munson, P.J., and Rodbard, D. 1978. Simultaneous analysis of families of sigmoidal curves: Application to bioassay, radioligand assay, and physiological dose-response curves. Am. J. Physiol. 235:E97-E102.
Dissanayake, V.U.K., Hughes, J., and Hunter, J.C. 1991. Opioid binding sites in the guinea pig and rat kidney: Radioligand homogenate binding and autoradiography. Mol. Pharmacol. 40:93-100.
Gacel, G., Dauge, V., Breuze, P., Delay-Goyet, P., and Roques, B.P. 1988. Development of conformationally constrained linear peptides exhibiting a high affinity and pronounced selectivity for opioid receptors. J. Med. Chem. 31:1891-1897.
Gillan, M.G.C. and Kosterlitz, H.W. 1982. Spectrum of the µ-, d- and k-binding sites in homogenates of rat brain. Br. J. Pharmacol. 77:461-469.
Kosterlitz, H.W., Paterson, S.J., Robson, L.E., and Traynor, J.R. 1987. Effects of cations on binding, in membrane suspensions, of various opioids at µ-sites of rabbit cerebellum and k-sites of guinea-pig cerebellum. Br. J. Pharmacol. 91:431-437.
Lahti, R.A., Mickelson, M.M., McCall, J.M., and VonVoigtlander, P.F. 1985. [3H]U-69593, a highly selective ligand for the opioid k receptor. Eur. J. Pharmacol. 109:281-284.
Mansour, A., Hoversten, M.T., Mansson, E., Bare, L., Watson, S.J., and Akil, H. 1995a. Apparent evidence of receptor subtypes: Receptor binding studies with the cloned rat and human k receptors. Analgesia 1:4-6.
Mansour, A., Hoversten, M.T., Taylor, L.P., Watson, S.J., and Akil, H. 1995b. The cloned µ, d, and k receptors and their endogenous ligands: Evidence for two opioid peptide recognition cores. Brain Res. 700:89-98.
Paterson, S.J., Robson, L.E., and Kosterlitz, H.W. 1986. Control by cations of opioid binding in guinea pig brain membranes. Proc. Natl. Acad. Sci. U.S.A. 83:6216-6220.
Pert, C.B. and Snyder, S.H. 1973. Opioid receptor: Demonstration in nervous tissue. Science 179:1011-1014.
Raynor, K., Kong, H., Chen, Y., Yasuda, K., Yu, L., Bell, G.I., and Reisine, T. 1994. Pharmacological characterization of the cloned k-, d-, and µ-opioid receptors. Mol. Pharmacol. 45:330-334.
Schiller, P.W., Weltrowska, G., Nguyen, T.M.-D., Wilkes, B.C., Chung, N.N., and Lemieux, C. 1993. TIPPy: A highly potent and stable pseudopeptide d opioid receptor antagonist with extraordinary d selectivity. J. Med. Chem. 36:3182-3187.
Simantov, R., Childers, S.R., and Snyder, S.H. 1978. [3H]Opioid binding: Anomalous properties in kidney and liver membranes. Mol. Pharmacol. 14:69-76.
Simon, E.J., Hiller, J.M., and Edelman, I. 1973. Stereospecific binding of the potent narcotic analgesic [3H]etorphine to rat brain homogenate. Proc. Natl. Acad. Sci. U.S.A. 70:1947-1949.
Simon, E.J. 1991. Opioid receptors and endogenous opioid peptides. Med. Res. Rev. 11:357-374.
Terenius, L. 1973. Characteristics of the "receptor" for narcotic analgesics in synaptic plasma membrane fraction from rat brain. Acta Pharmacol. Toxicol. 33:377-384.
Xue, J.-C., Chen, C., Zhu, J., Kunapuli, S., DeRiel, J.K., Yu, L., and Liu-Chen, L.-Y. 1994. Differential binding domains of peptide and non-peptide ligands in the cloned rat k opioid receptor. J. Biol. Chem. 269:30195-30199.
Zhang, W.-M., Jin, W.-Q., and Wong, T.M. 1996. Multiplicity of k opioid receptor binding in the rat cardiac sarcolemma. J. Mol. Cell. Cardiol. 28:1547-1554.
Raynor et al., 1994. See above.
Detailed description of binding to cloned opioid receptor subtypes, including an extensive evaluation of reference agents at each cloned receptor subtype.
Competition curves for reference compounds generated from Prism software. Shown is data demonstrating inhibition of [3H]diprenorphine binding to the d receptor by competition with unlabeled diprenorphine, bremazocine, and levorphanol.
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| Receptor | GenBank accession
number (human clone) |
Agonists | Antagonists |
| µ | P35372 | DAMGO, Sufentanil, PLO17 | CTOP |
| d | P41143 | DPDPE, BUBU | Naltrindole, TIPPy |
| k | P41145 | U69,593, CI977, ICI 197067 | Nor-binaltorphimine |
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a Abbreviations: BUBU, H-Tyr-D-(o-t-Bu)-Gly-Phe-Leu-Thr(o-t-Bu)-OH; CI977, [5R-5a,7a,8b]-N-methyl-N-[7-(1-pyrrolidinyl)1-oxaspiro[4,5]dec-8-yl]-4-benzofluranacetamide; CTOP, H-D-Phe-Cys-Tyr-D-Trp-Orn-Thr-Pen-Thr-NH2; DAMGO, (D-Ala2, N-Me-Phe4, glycinol5)-enkephalin; DPDPE, (D-Pen2, D-Pen5)-enkephalin; ICI 197067, (2S)-N-[2-(N-methyl-3,4-dichlorophenylacetamido)-3-methylbutyl]pyrrolidine HCl; PLO17, Tyr-Pro-MePhe, D-Pro-NH2; TIPPy, H-Tyr-Tic[CH2NH]-Phe-Phe-OH; U69,593, (5,7,8b)-N-methyl-N-[7-(1-pyrrolidinyl)1-oxaspiro[4,5]dec-8-yl]benzeneacetamide.
Table 1.4.2 Example of Titrations of Inhibitors
of [3H]Diprenorphine Binding to Cloned
d
Opioid Receptorsa
| [Inhibitor] | log[inhibitor]
(M) |
dpm bound | ||
|---|---|---|---|---|
| ±-Bremazocine | Levorphanol | Diprenorphine | ||
| 3.16 pM | 11.5 | 2306 | ||
| 10 pM | 11.0 | 2375 | ||
| 31.6 pM | 10.5 | 2386 | 2435 | 2238 |
| 100 pM | 10.0 | 2312 | 2355 | 2234 |
| 316 pM | 9.5 | 2085 | 2359 | 1997 |
| 1.0 nM | 9.0 | 2014 | 2324 | 1437 |
| 3.16 nM | 8.5 | 1701 | 2088 | 997 |
| 10 nM | 8.0 | 1229 | 2192 | 608 |
| 31.6 nM | 7.5 | 846 | 1693 | 518 |
| 100 nM | 7.0 | 487 | 1270 | 409 |
| 316 nM | 6.5 | 425 | 926 | 427 |
| 1.0 µM | 6.0 | 391 | 570 | 388 |
| 3.16 µM | 5.5 | 475 | 350 | |
| 10 µM | 5.0 | 390 | 357 | |
a Source of receptor was human d receptor stably expressed in CHO cells; 60 µg protein was added to each assay well. Total dpm added to each well was 43,600 dpm (1.0 nM); total binding determined in the absence of inhibitor was 2684 dpm; and nonspecific binding determined in the presence of 10 µM naloxone was 371 dpm.
Table 1.4.3 Example of Data Output from Prism for EC50 Determinationsa
| (±) Bremazocine | Levorphanol | Diprenorphine | |
|---|---|---|---|
| Variables | |||
| BOTTOM | 395.8 | 436.4 | 387.8 |
| TOP | 2307 | 2340 | 2328 |
| LOG EC50 | 8.137 |
7.112 | 8.872 |
| EC50 | 7.301e009 | 7.721e008 | 1.341e009 |
| Std. Error | |||
| BOTTOM | 46.21 | 56.32 | 17.37 |
| TOP | 33.31 | 40.04 | 33.14 |
| LOG EC50 | 0.06027 | 0.07324 | 0.03602 |
| 95% Confidence Intervals | |||
| BOTTOM | 291.3 to 500.3 | 309.0 to 563.8 | 348.5 to 427.1 |
| TOP | 2232 to 2383 | 2249 to 2430 | 2253 to 2403 |
| LOG EC50 | 8.273 to 8.000 | 7.278 to 6.947 | 8.954 to 8.791 |
| EC50 | 5.33e9 to 9.99e9 | 5.27e8 to 1.13e7 | 1.11e9 to 1.61e9 |
| Goodness of Fit | |||
| Degrees of Freedom | 9 | 9 | 9 |
| R2 | 0.9933 | 0.9901 | 0.9975 |
| Absolute Sum of Squares | 49,810 | 72,660 | 16,220 |
| Sy.x | 74.39 | 89.85 | 42.45 |
a Units of EC50 are molar (M). Exponent notation: 5.33e8 = 5.33 × 108. Sy.x is the standard deviation of the residuals (vertical distances of the points from the line); its value is expressed in the same units as Y, in this case dpm.
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| Problem | Possible cause | Solution |
|---|---|---|
| No binding | Receptor is absent or present at low concentration | Try higher protein concentration and longer incubation |
| Specific binding has been washed away in the filter rinse step | Check whether the expected affinity (Kd) of the ligand is at or below 50 nM; lower-affinity binding is difficult to measure in a filtration assay because specific binding can be removed by the filter wash | |
| Ligand or receptor has degraded (has been metabolized by enzymes in the membrane prep or may be chemically unstable under the assay conditions used) | Add inhibitor(s) of enzymes known or suspected to degrade ligand; these might include protease inhibitors, antioxidants, or inhibitors or enzymes known to metabolize ligand in vivo. Optimize assay conditions (e.g., reduce temperature). | |
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| Very high binding (>10% of total radioactivity added) | Membrane concentration is too high | Try a lower protein concentration |
| Ligand binding to the filters has occurred | Peptide ligands or charged ligands often bind to glass fiber filters. For peptides or positively charged ligands, try presoaking the filters in 0.5% polyethyenimine (PEI) and 0.1% bovine serum albumin (BSA) in rinse buffer; for negatively charged ligands, try BSA alone on the filter or in the assay buffer. It is important to be aware that the ligand may bind to BSA, reducing the concentration of free ligand in the assay; hence, it may be better to presoak the filters in BSA rather than adding it to the assay. | |
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| Binding that is not linear with protein concentration | Too much membrane prep has been used in the assay | Try a lower protein concentration |
| Binding to the filters has been inhibited by protein or other components of the membranes | Filter binding may decrease as protein concentration in the assay is increased, resulting in both total and specific binding that does not seem to show good linearity with protein concentration. Try boiling a portion of a membrane prep to denature the receptor and then adding boiled membranes in decreasing amounts to the increasing amounts of receptor preparation so that the overall protein concentration is constant. It may not be necessary to continue this practice in routine assays if the binding is small or limited to nonspecific binding. | |
| Ligand has been metabolized by enzyme(s) in the membrane preparation | The rate of metabolism may increase as the protein concentration is increased. If a mechanism for the metabolism is known, add an appropriate enzyme inhibitor, if available. Alternatively, perform the assay on ice to reduce metabolism while retaining receptor binding. | |
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| Binding that reaches a peak but then declines over time | Ligand has been metabolized by enzyme(s) in the membrane preparation | See above (under No binding) |
| Receptor has degraded | See above (under No binding) | |
| Ligand has aggregated, precipitated, or bound to the container | Try adding a small amount of a carefully tested solvent or detergent. The best solvents would probably have some polar character, e.g., DMSO or methanol. The effects of detergents on the receptor, membrane, or ligand are difficult to predict, so the optimal detergent must be determined empirically. Diprenorphine is a ligand of choice, especially when used in conjunction with cell ligands selectively transfected with a given receptor. This ligand is chemically very stable (see Commentary). | |
| Compound | Ki values (nM) | Compound source | ||
|---|---|---|---|---|
| µ | d | k | ||
| b-Funaltrexamine | 0.9 | 12 | 1.4 | Tocris Cookson |
| Bremazocine | 0.85 | 0.92 | 0.12 | RBI |
| BUBUb | 4.75 | 4.7 | ND | Bachem |
| CTOP | 3.5 | >10,000 | >10,000 | Bachem |
| DAMGO | 14 | >10,000 | >10,000 | Bachem |
| Dextrorphan | >10,000 | >10,000 | >10,000 | RBI |
| Diphenoxylate | 54 | 310 | >1,000 | RBI |
| Diprenorphine | 0.27 | 0.31 | 0.20 | RBI |
| DPDPE | >10,000 | 2.2 | >10,000 | Bachem |
| Fentanyl | 13 | 310 | 900 | RBI |
| GR89696 | 31 | 76 | 0.51 | RBI |
| Levorphanol | 2.3 | 8.6 | 7.7 | RBI |
| Morphine | 19 | 220 | 230 | RBI |
| Nalbuphine | 6.0 | 140 | 50 | RBI |
| Naloxone | 2.3 | 24 | 12 | RBI |
| Naloxone benzoylhydrazone | 0.54 | 4.1 | 1.0 | RBI |
| Nor-binaltorphimine | 51 | 7.2 | 0.042 | RBI |
| SNC-80 | >1,000 | 0.47 | >1,000 | Tocris Cookson |
| Spiradoline | 150 | >1,000 | 2.3 | RBI |
| Sufentanylc | 0.15 | 50 | 75 | Janssend |
| TIPPya | 3228 | 0.31 | >1,000 | McGill Universityd |
| U-50,488 | >1,000 | >1,000 | 4.2 | RBI |
| U-69,593 | 720 | >1,000 | 12 | RBI |